PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCH99242.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

ARR-B

Protein Properties

Length: 187aa MW: 21662.9 Da PI: 6.5119

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCH99242.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	26	2.1e-08	156	177	1	22
G2-like 1 kprlrWtpeLHerFveaveqLG 22 k+r++W+ +LH++Fv+av+q+G MCH99242.1 156 KARVVWSVDLHQKFVKAVNQIG 177 68******************97 PP
2	Response_reg	57.5	7.5e-20	6	84	32	109
HHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS Response_reg 32 geealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109 ++ al ll+e++ +D+++ D++mp+mdG++ll++ e +lp+i+++ ge + + + ++ Ga d+l Kp+ ++el++ MCH99242.1 6 ARHALSLLRERKdgYDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRN 84 66789999888889********************6644.8*********************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 187 aa Download sequence
TTCCLARHAL SLLRERKDGY DIVISDVNMP DMDGFKLLEH VGLEMDLPVI MMSVDGETSR 60 VMKGVQHGAC DYLLKPIRMK ELRNIWQHVF RKRIHEVRDF ENFESFESMH LMINGSELSD 120 EGNLFALEDM TSTKKRKDLD NKHDDKEFLD SSSSKKARVV WSVDLHQKFV KAVNQIGFDS 180 KFLVQVL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	2e-73	ARR-B family protein