PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH99257.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family NF-YA
Protein Properties Length: 130aa    MW: 14956.4 Da    PI: 10.6811
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH99257.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA45.81.9e-1472107137
   CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkp 37 
                 d p+YVNaKQy++I++RRq+Rak+   +kl +k rk 
  MCH99257.1  72 DGPIYVNAKQYHGIIRRRQSRAKAVLGQKL-IKRRKS 107
                 57***************************9.555553 PP
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    
DFKMSGDAQK PHTAISLQSS LPDTPPRFEL GFNQPMICTK YPYADQFYGL ISTYGPQIPG  60
RVMLPLNMTS DDGPIYVNAK QYHGIIRRRQ SRAKAVLGQK LIKRRKSNRI HLLEKQGFMV  120
LFFFAYKTRT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
187106RRRQSRAKAVLGQKLIKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.36e-33NF-YA family protein