PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH99432.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family C3H
Protein Properties Length: 246aa    MW: 26961.1 Da    PI: 5.1081
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH99432.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH23.11.3e-07192210625
                 -SGGGGTS--TTTTT-SS-S CS
     zf-CCCH   6 CrffartGtCkyGdrCkFaH 25 
                 C ffa+ G+C +G++C+F H
  MCH99432.1 192 CAFFAQ-GWCIRGSSCSFLH 210
                 999***.************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MELDGKEKNL EPVSSVPENP EVIRPEHDME ENDAMLKASV PSHEELTLKK EEFPLKQEVL  60
SPPKPSENLI PAEDGKNQGL NVDVENSGHL QRKIFGGCSE PYCNSKASLS DVKSIDSRAT  120
KSSSDTGKDV VTGIIPRGNF VEDADGGQNS QEKIMQSEME PRVDVKQKQS RTRSLSPSAA  180
MKDGNKRPAI TCAFFAQGWC IRGSSCSFLH IKDSVNNTGQ GVEGDLVTAH QKRELKLEKG  240
VKENVD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33835.17e-10C3H family protein