PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH99709.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family WRKY
Protein Properties Length: 134aa    MW: 15269 Da    PI: 8.6102
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH99709.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.57.5e-3065125259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                 +DgynWrKYGqK++ ++++prsYYrCt++   +C+++k+v+rs+edp++++itY+g+H+++
  MCH99709.1  65 EDGYNWRKYGQKDILSAKHPRSYYRCTFRntqNCWATKQVQRSDEDPTIFDITYKGKHTCS 125
                 8**************************998889**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    
TITPLTTSLP ESPASTNGSP LSEDFDGAIQ DHREVKNKSK KRKVMPKLMD QIKVSCESGL  60
EGPHEDGYNW RKYGQKDILS AKHPRSYYRC TFRNTQNCWA TKQVQRSDED PTIFDITYKG  120
KHTCSQGNNA IEPY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.28e-55WRKY family protein