PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI00083.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

WRKY

Protein Properties

Length: 218aa MW: 24546.4 Da PI: 8.44

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI00083.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	50.5	4.1e-16	1	37	23	59
EEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 23 sYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 sYY+Cts gC+v+k+ver+++d k+v++tYeg+Hnhe MCI00083.1 1 SYYKCTSDGCNVRKHVERASHDLKYVITTYEGKHNHE 37 8***********************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 218 aa Download sequence
SYYKCTSDGC NVRKHVERAS HDLKYVITTY EGKHNHEVPT SRNNNQISSN DIALPSCGDN 60 MQVSNISKFE THQTLAPHFD RKPYFSNEFM RPSSIGSFSN DMKFGPSSTS MFQRKYPSLN 120 SIIPYGSYGT NSDHGVAPQA GPIGTRFPMP LPLNLPSSEI FPLSRNIFNY AKPLNYIQSY 180 LSGQHMNDID TRFLDHTSTS LTPPSTLIYQ SVMQNFPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	3e-19	WRKY family protein