PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI00152.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family NF-YB
Protein Properties Length: 69aa    MW: 7437.35 Da    PI: 7.5245
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI00152.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB88.47.4e-282269249
       NF-YB  2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtse 49
                reqdrflPian+srimkk+lPan+ki+kdaketvqecvsefisf+tse
  MCI00152.1 22 REQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSE 69
                89********************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 69 aa     Download sequence    
APASPGGGSH ESGEHSPRSN IREQDRFLPI ANISRIMKKA LPANGKIAKD AKETVQECVS  60
EFISFITSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38880.74e-29NF-YB family protein