PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI00271.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family bHLH
Protein Properties Length: 155aa    MW: 17389.2 Da    PI: 10.3889
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI00271.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.44e-111159455
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                ++  rE+ RRd++N++f eL + l +    + +K +Ka+iL  A + +k+L+
  MCI00271.1 11 SKACREKLRRDKLNDKFVELGSFLEPG---RPPKTDKAAILIDAARMVKQLR 59
                5778**********************8...89******************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    
GRSDSCAPSS SKACREKLRR DKLNDKFVEL GSFLEPGRPP KTDKAAILID AARMVKQLRG  60
EAQKLKDSNS NIQEKIKELK VEKNELRDEK QRLKAEKEKL EQLMKSMNAQ PSFLTHPPPI  120
PAAFAPQGQV PGNKLMPFMS YPGVAMWQFM PPASV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.14e-83bHLH family protein