PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI00437.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family GRAS
Protein Properties Length: 161aa    MW: 18727.4 Da    PI: 7.5038
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI00437.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS199.32.3e-612161214374
        GRAS 214 ldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetl 312
                 +desvs++++rd++L+lvkslsPkvv++veqe+++n++ F+ rfle+++yy+a+f+s++++lpre++eri+vE+++l+r++vn++aceg er+erhe l
  MCI00437.1   2 PDESVSTQNHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFLETMDYYTAMFESIDVTLPREHKERINVEQHCLARDLVNIIACEGVERVERHELL 100
                 799************************************************************************************************ PP

        GRAS 313 ekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +kWr+r+ +aGF+p+pls+ ++ ++k ll++++++ yr++e++g+l+lgW++r Lv+ +aW+
  MCI00437.1 101 GKWRSRFAMAGFTPYPLSSLVNGTIKKLLENYSDR-YRLQEKDGALYLGWMNRDLVASCAWK 161
                 *********************************66.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MPDESVSTQN HRDRLLRLVK SLSPKVVTLV EQESNTNTAA FFPRFLETMD YYTAMFESID  60
VTLPREHKER INVEQHCLAR DLVNIIACEG VERVERHELL GKWRSRFAMA GFTPYPLSSL  120
VNGTIKKLLE NYSDRYRLQE KDGALYLGWM NRDLVASCAW K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-107GRAS family protein