PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI00869.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

C2H2

Protein Properties

Length: 167aa MW: 18646.6 Da PI: 8.1069

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI00869.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14	0.00015	61	83	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ L H++ H MCI00869.1 61 FSCNYCRRKFYSSQALGGHQNAH 83 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 167 aa Download sequence
PNSSILTNPT ELNPHSDPIS LDLSLNFNIN NDLVARDSTG ISFSSTSETE SSNEPIIPRV 60 FSCNYCRRKF YSSQALGGHQ NAHKRERTLA KRAMRMGLFA ERYASLASLP LNGNSFRSLE 120 LFWQGSFHQV TDGGRVGSTH WKLNNHTSDF DITGSNTRQS SNLCFTE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G24625.1	2e-25	C2H2 family protein