PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI01153.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

TCP

Protein Properties

Length: 183aa MW: 20412.1 Da PI: 4.5231

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI01153.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	41.3	5.5e-13	1	82	38	112
TCP 38 eLGfdkdsktieWLlqqakpaikeltgt......ssssaseceaesssssasnsssg....kaaksaa.kskksqksaasalnlak 112 +LG+d++sk+++WL+++ak ai++l ++ + +++e+e ++++ + ++ ++++s+ + +++++++++++++ + MCI01153.1 1 RLGYDRPSKAVDWLIKKAKSAIDKLDQLppwnpiP----NATEEEGTNNNVVETNEMviaaENSESSGyNMQQNNHNHHNHSAFIQ 82 7***************************6654331....22322222222222222255553333333366666666665555554 PP

Sequence ? help Back to Top
Protein Sequence Length: 183 aa Download sequence
RLGYDRPSKA VDWLIKKAKS AIDKLDQLPP WNPIPNATEE EGTNNNVVET NEMVIAAENS 60 ESSGYNMQQN NHNHHNHSAF IQSTIDNDAI AFFPTSSVAE TMNFQSYSSD IISRTNNSTQ 120 DLGLSLHSFQ DNSATNDQTL FSESNPVGFD ANYHRIVNWN NDHGTTDMNR TGFMVNSPAF 180 LGQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	5e-23	TCP family protein