PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI01154.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

NF-YB

Protein Properties

Length: 137aa MW: 15357.1 Da PI: 5.0748

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI01154.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	174	1.6e-54	20	113	4	97
NF-YB 4 qdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 q+r+lPianv+rimkk+lPa+akisk++ket+qecvsefisf+t+eas+kcq+ekrktingddllwa++tlGfe+y+eplk yl++yre+eg+k MCI01154.1 20 QERLLPIANVGRIMKKALPAKAKISKESKETMQECVSEFISFITGEASEKCQKEKRKTINGDDLLWAMTTLGFEEYAEPLKGYLHRYREIEGDK 113 89******************************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 137 aa Download sequence
MAESDDESGG QASGSRELLQ ERLLPIANVG RIMKKALPAK AKISKESKET MQECVSEFIS 60 FITGEASEKC QKEKRKTING DDLLWAMTTL GFEEYAEPLK GYLHRYREIE GDKNFSMSMI 120 GKEQQGSSSA DXRFFQG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14540.1	2e-61	NF-YB family protein