PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI01159.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family Nin-like
Protein Properties Length: 187aa    MW: 20367.4 Da    PI: 5.1282
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI01159.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK45.71.3e-141252852
      RWP-RK 28 clTvLKriCRqyGIkRWPhRkiksl 52
                c+T+LKriCR++GI+RWP+Rki+++
  MCI01159.1  1 CPTTLKRICRHHGISRWPSRKINKV 25
                9**********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
CPTTLKRICR HHGISRWPSR KINKVNRSLK KIQTVLDSVE GVEGGLKFDP SVGAFVAKGT  60
AIQEIDENRS LPFPEKSTTE DSEPFSQDAA SVPPAHCSDG ENSANKLDGK LKXTNASLID  120
CSEDSKSFAM DDCPEQACFG SVLGKGDEWV LNKGSLREEE KCKHNTIGHR TSSFVGYEMD  180
TGVDGDD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59580.12e-32Nin-like family protein