PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI01225.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family TCP
Protein Properties Length: 110aa    MW: 12694.1 Da    PI: 10.0944
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI01225.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP102.76.3e-3247109264
         TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltg 64 
                  g+kdrhsk+ T++g+RdRRvRls+++a++f+dLqd+LG+d++sk++eWL++ a  ai el++
  MCI01225.1  47 SGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKSASDAISELPS 109
                 689*********************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 110 aa     Download sequence    
MEEDEIQAQH KFPRVGNEED NNNGRRDVNR FNSWHHSSRI IRVSRASGGK DRHSKVMTSK  60
GLRDRRVRLS VTTAIQFYDL QDRLGYDQPS KAVEWLIKSA SDAISELPSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18390.12e-46TCP family protein