PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI01373.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family FAR1
Protein Properties Length: 331aa    MW: 38058.6 Da    PI: 8.2869
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI01373.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR133.81.1e-1011495290
        FAR1 52 rrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                + ++ ++rtgC a ++v+++++gkw+v++++++HnH+l 
  MCI01373.1 11 EGHQLSSRTGCPAFIRVQLNDSGKWVVDHFHKDHNHSLE 49
                4456779*****************************996 PP
2FAR162.51.3e-19129203189
        FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                 +fY+++A  +GF +r+ +  +sk++g it+r+fvCskeg++++              +r+gC+a l++k++ +gkw+v++le++HnH+l
  MCI01373.1 129 QFYHAHAAYLGFGIRIGQLFRSKNDGLITSRRFVCSKEGFQHP--------------SRVGCRAYLRIKRQPSGKWVVDRLEKDHNHDL 203
                 6***************************************999..............4899**************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
VSSRRYVCSK EGHQLSSRTG CPAFIRVQLN DSGKWVVDHF HKDHNHSLEN ESENFAPTLQ  60
SNGAAAIDSS TTEVTRRPRK KKIEVANDEP ICPFGVIDFK RLRKEELEGQ ARIEPHVGQE  120
FNTPNEAYQF YHAHAAYLGF GIRIGQLFRS KNDGLITSRR FVCSKEGFQH PSRVGCRAYL  180
RIKRQPSGKW VVDRLEKDHN HDLGLEKESK TKSIPASNIL NEEVNTELVN DDIFRIDNYP  240
VLRGGRQNHI RSDWYNMLLE YFQSKQAEDT GFFYSMEVDN GNCMSIFWAD GRSRYSCSQF  300
GDVLVVDTSY RKSVYMVPFA TFVGVNHHKQ P
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17682RRPRKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.11e-124FAR1 family protein