PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI01600.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family G2-like
Protein Properties Length: 184aa    MW: 21031.9 Da    PI: 9.3915
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI01600.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like85.16.9e-2781134155
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 k rl Wtp+LH +F++av+qL G ++A+Pk+il+ m+ +gLtl hv+SHLQkYR 
  MCI01600.1  81 KSRLSWTPDLHGQFMSAVNQL-GVNNAVPKEILKRMNFPGLTLGHVASHLQKYRK 134
                 68*******************.9*******************************6 PP
2Myb_DNA-binding42.61.4e-1383133148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r++WT++++ ++  av+qlG +   +k I ++m+  g+tl ++ s++qky+
       MCI01600.1  83 RLSWTPDLHGQFMSAVNQLGVNnaVPKEILKRMNfPGLTLGHVASHLQKYR 133
                      789*******************9***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MSLDQTKDSV MNSITEGACA YWAKPLDENQ FKNMWQHVVR NALSQQSEPS EFLQTMEVKG  60
GSKKRVREEH VDVPKQPLPK KSRLSWTPDL HGQFMSAVNQ LGVNNAVPKE ILKRMNFPGL  120
TLGHVASHLQ KYRKYLKGGI RKSKLSGGSD FQGHDEMHTR QQQWTDIGES DIFFYLSDLF  180
PDLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.12e-28ARR-B family protein