PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI01625.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

WRKY

Protein Properties

Length: 159aa MW: 18035.1 Da PI: 5.2454

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI01625.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	32.4	1.9e-10	139	159	1	21
---SS-EEEEEEE--TT-SS- CS WRKY 1 ldDgynWrKYGqKevkgsefp 21 ldDgy+WrKYGqK vk+s++p MCI01625.1 139 LDDGYRWRKYGQKAVKNSTYP 159 59****************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 159 aa Download sequence
MNQECSMESQ DPPNPPPPLM MPPPPPPPQN NTFFTPLQNY PLESQDQCLG DIDWGNFFLG 60 QNNNNNLLVG DAKETLMDNI QCTSSSSNLL VNNNESGSYQ LHEVEKGNKE EKRIKGGRLK 120 KTTKVPRFAF QTRSVDDILD DGYRWRKYGQ KAVKNSTYP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41570.1	7e-16	WRKY family protein