PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI01761.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

Protein Properties

Length: 178aa MW: 20089.5 Da PI: 9.6381

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI01761.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	102.7	2e-32	2	107	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefe 91 f+k ltpsdv+k++rlv+pk++ae++ ++ + ++ l++edesg+ W+++++y+++s++yvltkGW+++vk+++L++gD+v+F+++ r ++++ MCI01761.1 2 FEKPLTPSDVGKLNRLVIPKQYAEKYfplggvsDSAECKGLLLSFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKDKRLDAGDVVLFERH-RfDSQR 99 99*************************9987666668899********************************************75.559999 PP .EEEEE-S CS B3 92 lvvkvfrk 99 l++ ++r+ MCI01761.1 100 LFINWRRR 107 **9996 PP

Sequence ? help Back to Top
Protein Sequence Length: 178 aa Download sequence
MFEKPLTPSD VGKLNRLVIP KQYAEKYFPL GGVSDSAECK GLLLSFEDES GKCWRFRYSY 60 WNSSQSYVLT KGWSRYVKDK RLDAGDVVLF ERHRFDSQRL FINWRRRLSG EDQSAAYVSR 120 AVVGGHGGKS SSNGGGNSKN EVVSGVGVGW SRGFYSAHVP YPAHHQVLPY QHDHCLHA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11580.2	3e-60	B3 family protein