PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI02042.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

bHLH

Protein Properties

Length: 199aa MW: 22172.6 Da PI: 8.9399

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI02042.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	16.6	1.4e-05	169	197	2	30
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 2 rrahnerErrRRdriNsafeeLrellPka 30 ++ h ++Er+RR+++ ++f L +P + MCI02042.1 169 CVDHIMAERKRRQELTQRFIALSATIPGL 197 7789**********************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 199 aa Download sequence
MECGGDDYFM EKYNAVNIDG DDFLREILLQ TPEQSLMEYS GSENGSVTVN VNGDVEVVGN 60 MVKSNSSNSI VSQKQXXXXX XQQRLKSKKV VVPRRCSSPK TYILSFDNST MIPATPEPCV 120 NLEAGGKRDY CSKSDYSKKN KLESSEKGEI MKTNTKNQGV KKARSGSQCV DHIMAERKRR 180 QELTQRFIAL SATIPGLSK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	176	181	ERKRRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22750.2	7e-12	bHLH family protein