PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI02059.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family ERF
Protein Properties Length: 197aa    MW: 22016.1 Da    PI: 9.9223
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI02059.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.25.7e-20655255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f tae Aa a+++a+++++g
  MCI02059.1  6 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFETAEAAAIAYDEAALRFKG 55
                7********.**********94....45***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
SVRRRHYRGV RQRPWGKWAA EIRDPKKAAR VWLGTFETAE AAAIAYDEAA LRFKGSKAKL  60
NFPERVQSSA EFGYNQQFHH IASNTSNMQQ SNQQVPLPQF SQETYSNPYQ YAAQAQLQAS  120
GSSNFNQDML RFYGRDMFVS NSQPLISNAS SSSSSSSGLS QQQQEFLRLS MQFGGSSSSS  180
SAYEPPSNWG DGMDGKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.13e-21ERF family protein