PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI02208.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family WRKY
Protein Properties Length: 147aa    MW: 16167.5 Da    PI: 5.2836
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI02208.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY24.46e-082263560
                EEEEEE-SSSTTEEEEEEES--SS-- CS
        WRKY 35 kkkversaedpkvveitYegeHnhek 60
                kkkve++  d++++ei+Y+g+Hnh+k
  MCI02208.1  2 KKKVEKDL-DGQITEIVYKGTHNHPK 26
                9*******.***************85 PP
2WRKY31.63.2e-10127146120
                 ---SS-EEEEEEE--TT-SS CS
        WRKY   1 ldDgynWrKYGqKevkgsef 20 
                 ldDg++WrKYGqK+vkg+++
  MCI02208.1 127 LDDGFRWRKYGQKVVKGNPN 146
                 59****************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    
MKKKVEKDLD GQITEIVYKG THNHPKPQSN RRTSSQPSSS CTNSGISDQS VMDHVSIQED  60
SSASVGEEEF EQTSQTSYSG GGNDDANGPE AKRWKGDNEN DVYSASASRT VKEPRVVVQT  120
TSEIDILDDG FRWRKYGQKV VKGNPNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38470.15e-41WRKY family protein