PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI02295.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family MYB_related
Protein Properties Length: 156aa    MW: 17203 Da    PI: 4.6686
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI02295.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.57.4e-14139545
                     -HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     T+eE++ l++a++ +G++ W+   + ++ gRt++ +k++w+
       MCI02295.1  1 TQEEELALIRAHQIYGNK-WAELTKFLP-GRTDNAIKNHWN 39
                     99****************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
TQEEELALIR AHQIYGNKWA ELTKFLPGRT DNAIKNHWNS SVKKKLDSYL ASGLLTQLQS  60
VPHVGNPSQP MVATSSRLQC KEEDNVLQGT EGDEFLECSH ESANALQFPS TREMTSVDSQ  120
TVGGYRPNEE CSLATDHSPS QASCSEPYYL AIDAVT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32730.23e-34MYB family protein