PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI02410.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family GRAS
Protein Properties Length: 161aa    MW: 18187 Da    PI: 8.6975
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI02410.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS160.71.2e-49216025181
        GRAS  25 arlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIleavegeervHiiDfdisqGl 123
                 + l+el+sp+gd+ q+l +yf++AL +r+++ ++++yk+l+  ++++ + +++ ++l  f+evsP+ +f+h++ N aIlea+eg+ ++HiiD++ ++++
  MCI02410.1   2 WMLNELSSPYGDTEQKLSSYFLQALFSRMNDAGDRTYKTLTFASEKTCSFDSTRKMLLKFQEVSPWTTFGHVASNGAILEALEGNPKLHIIDISNTYCT 100
                 789*************************************9999886666666566666**************************************** PP

        GRAS 124 QWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvl 181
                 QWp+Ll+aLa+R++++p+lR+T+v+ + sg   ++ ++e+g r++kfA+ +gvpf+f+++
  MCI02410.1 101 QWPTLLEALATRSDDTPHLRLTTVVTAISGgsVQKVMKEIGTRMEKFARLMGVPFKFKII 160
                 **************************8888999999*********************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MWMLNELSSP YGDTEQKLSS YFLQALFSRM NDAGDRTYKT LTFASEKTCS FDSTRKMLLK  60
FQEVSPWTTF GHVASNGAIL EALEGNPKLH IIDISNTYCT QWPTLLEALA TRSDDTPHLR  120
LTTVVTAISG GSVQKVMKEI GTRMEKFARL MGVPFKFKII F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.13e-84GRAS family protein