PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI02474.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family NAC
Protein Properties Length: 145aa    MW: 16552.4 Da    PI: 9.9676
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI02474.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM134.85.8e-4271311128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                 lppGfrFhPtdeelv++yL++k++++++ +  +i+e+d+yk++PwdLp                        r+nra+ sgyWkatg dk++ +   + 
  MCI02474.1   7 LPPGFRFHPTDEELVMHYLCRKCTSQPIAV-PIIAEIDLYKYDPWDLPGXXXXXXXXXXXXXXXXXXXXXXXRPNRAAGSGYWKATGADKPIGH--PKP 102
                 79**************************99.88***************655455555666677777777899********************99..789 PP

         NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                 vg+kk Lvfy g+apkg kt+W+mheyrl
  MCI02474.1 103 VGIKKALVFYAGKAPKGDKTNWIMHEYRL 131
                 ***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
MASELQLPPG FRFHPTDEEL VMHYLCRKCT SQPIAVPIIA EIDLYKYDPW DLPGXXXXXX  60
XXXXXXXXXX XXXXXXXRPN RAAGSGYWKA TGADKPIGHP KPVGIKKALV FYAGKAPKGD  120
KTNWIMHEYR LADVDRSIRK KNSLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.15e-76NAC family protein