PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI02543.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

NAC

Protein Properties

Length: 101aa MW: 11863.7 Da PI: 10.4091

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI02543.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	86.4	5.4e-27	3	77	54	128
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++w+fF++r++++ +g r++r t++gyWk tg+ ++v+s++++++g+k+t+vfy grap+g+ktdW m+ey++ MCI02543.1 3 DKEQWFFFIPRQZSEVRGGRPRRLTTTGYWKXTGSPNHVYSSDNRVIGMKRTMVFYCGRAPNGKKTDWKMNEYKA 77 5679*********************************************************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 101 aa Download sequence
MSDKEQWFFF IPRQZSEVRG GRPRRLTTTG YWKXTGSPNH VYSSDNRVIG MKRTMVFYCG 60 RAPNGKKTDW KMNEYKAIQL DHEASSSNKV EPKVRHVQYV S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G44350.2	2e-31	NAC family protein