PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI03241.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family MYB_related
Protein Properties Length: 103aa    MW: 12002.7 Da    PI: 10.7191
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI03241.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.72.3e-171155147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +WT eE++++++a k++G g W+ I +++g  +t+ q++s+ qk+
       MCI03241.1 11 REKWTDEEHQKFLEALKLYGRG-WRQIEEHIG-SKTAVQIRSHAQKF 55
                     789*******************.*********.************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 103 aa     Download sequence    
VRKPYTITKQ REKWTDEEHQ KFLEALKLYG RGWRQIEEHI GSKTAVQIRS HAQKFFSKVV  60
REPDGSAESS IQPIDIPPPR PKRKPLHPYP RKSIDSFKGQ SAP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17300.18e-37MYB_related family protein