PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI03426.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

WRKY

Protein Properties

Length: 208aa MW: 23178.3 Da PI: 8.2251

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI03426.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.8	9.4e-33	28	84	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgynWrKYGqK+vkgsefprsYY+Ct+++Cpvkkkvers ++v+ i+Y+geHnh+ MCI03426.1 28 DDGYNWRKYGQKHVKGSEFPRSYYKCTHPSCPVKKKVERSL-AGHVTAIIYKGEHNHQ 84 8**************************************.9************8 PP
2	WRKY	33.4	9.1e-11	188	208	1	21
---SS-EEEEEEE--TT-SS- CS WRKY 1 ldDgynWrKYGqKevkgsefp 21 ldDgy+WrKYGqK+vkg+++p MCI03426.1 188 LDDGYRWRKYGQKVVKGNPYP 208 59*****************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 208 aa Download sequence
SVSASTDHAA LSEQRQQSSS LNVDKPADDG YNWRKYGQKH VKGSEFPRSY YKCTHPSCPV 60 KKKVERSLAG HVTAIIYKGE HNHQRPSNKR SKDTLTSNDS SNMQGNADSS YQGMMDPESS 120 QATGEHVSGT SDSEEIGDXX XXXXXXRVEP DPKRRNTEIV VSDPAASSHR TVAESRIIVQ 180 TTSEVDLLDD GYRWRKYGQK VVKGNPYP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03340.1	8e-83	WRKY family protein