PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI03439.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

bZIP

Protein Properties

Length: 163aa MW: 18418.6 Da PI: 9.4122

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI03439.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	40.4	6.2e-13	1	47	10	59
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 10 kqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 k +NRe+ArrsR+RK+a ++ Le v++L eN +L ++l++ +++ MCI03439.1 1 KVSNRESARRSRRRKQAHLADLEVQVEQLRLENASLF---KQLTDASQQF 47 579*******************************999...5555555554 PP

Sequence ? help Back to Top
Protein Sequence Length: 163 aa Download sequence
KVSNRESARR SRRRKQAHLA DLEVQVEQLR LENASLFKQL TDASQQFRDA NTNNRVLKSD 60 VEALRAKVKL AEDMVSRGTL PTFNNHLLQN QSQLNTXXXX XXXXXXXXXX XXXXXXXXXX 120 XXXXXXXXGQ NSAIGLGDFD ISCSDFNNGV NSDAVSSLTS IWP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	9	16	RRSRRRKQ
2	11	16	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24800.1	2e-27	bZIP family protein