PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI03797.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family ERF
Protein Properties Length: 179aa    MW: 19989.6 Da    PI: 10.2193
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI03797.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP238.82.4e-123972138
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgt 38
                + ykGVr++  +g+WvAeIr+p   + r +r +lg+f t
  MCI03797.1 39 CPYKGVRQRT-WGKWVAEIREP---N-RgARLWLGTFKT 72
                68*****999.**********8...3.35********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MMKSDMEVEQ RKKSKKPAQQ ANSRKGCMKG KGGPENASCP YKGVRQRTWG KWVAEIREPN  60
RGARLWLGTF KTSXXXXXXX XXXXXKLYGS RAKLNLPEIS MSKKSQGQQS LPDPQNVKTG  120
DSYPPQINHS VDMVTSSDFN ANPNPTIPMA SQPLRNNDCT PSLPLDGNPN PIDPTFEDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.16e-39ERF family protein