PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI03981.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family NAC
Protein Properties Length: 227aa    MW: 26057.6 Da    PI: 10.4645
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI03981.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM91.51.4e-2868354128
         NAM  54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk...kgelvglkktLvfykgrapkgektdWvmheyrl 128
                  eke yfF+kr +ky+++ r+nr+t sg+Wkatg dk+++s+   ++  vglkktLv+y+g+a kg+ktdW+mhe+rl
  MCI03981.1   6 AEKEAYFFCKRGRKYKNSIRPNRVTGSGFWKATGIDKPIYSNggeGKDCVGLKKTLVYYRGSAGKGTKTDWMMHEFRL 83 
                 57899************************************96655556***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
SSVPGAEKEA YFFCKRGRKY KNSIRPNRVT GSGFWKATGI DKPIYSNGGE GKDCVGLKKT  60
LVYYRGSAGK GTKTDWMMHE FRLPSKIIDA NTNLPYAKNF DVDNAHEAKV EREALYRASG  120
AVRLTEFDPV RKDGFVNRLN KETTSFFFTN FPEETQVVEL WTLFAKHGRI GEVYIPQKRD  180
KRGNRFGFVK FKDVKNLEAL SERLEDVWLG SFKLRVNLSR FGRNSSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12910.16e-44NAC family protein