PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI04078.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family B3
Protein Properties Length: 182aa    MW: 20271.2 Da    PI: 9.2916
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI04078.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B379.34e-2572173199
                 EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 f k+ltpsd+++ g +++p+ +a+++       + ++ +   l+++d +g +We+++iyr++++r++lt+GW++Fv+ ++L +gD+vvF+  +++++ +
  MCI04078.1  72 FAKILTPSDANNGGGFSVPRFCADSIfppldytMDPPFQ--SLSITDVHGLTWEFRHIYRGTPRRHLLTTGWSRFVNGKKLVAGDSVVFM--KNTRGAM 166
                 89*********************999****995444444..6999*********************************************..7799999 PP

                 EEEEE-S CS
          B3  93 vvkvfrk 99 
                 +v+++r+
  MCI04078.1 167 FVGIRRA 173
                 ****996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MDQASSLPNN LSPQLLSRPY ILCTVSGVHF LADPKTDEVF AKLFLQPLND FTAVFSRAVI  60
QEVDDGERIS SFAKILTPSD ANNGGGFSVP RFCADSIFPP LDYTMDPPFQ SLSITDVHGL  120
TWEFRHIYRG TPRRHLLTTG WSRFVNGKKL VAGDSVVFMK NTRGAMFVGI RRAVRFVPAR  180
SC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77850.11e-66ARF family protein