PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI04639.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family C2H2
Protein Properties Length: 112aa    MW: 12998.7 Da    PI: 7.853
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI04639.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.51.1e-052446123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C  Cg++F++   L+ H ++H
  MCI04639.1 24 HVCFECGRTFKTLQGLHIHESSH 46
                79******************999 PP
2zf-C2H216.42.6e-0589112123
                 EEETTTTEEESSHHHHHHHHHH.T CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                 ++C++C   Fs+ ++L +H  + H
  MCI04639.1  89 FQCNYCASKFSTAEELDNHVANrH 112
                 89*****************99877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 112 aa     Download sequence    
MPESKIYEQG RSLKIHYLIK DMFHVCFECG RTFKTLQGLH IHESSHSKAR CDQCGEIFSS  60
PQACGRHRNT HRIIEYHPPP HPPIPEIPFQ CNYCASKFST AEELDNHVAN RH