PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI04965.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family GRAS
Protein Properties Length: 118aa    MW: 13682.5 Da    PI: 5.2171
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI04965.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS91.61.2e-282115258373
        GRAS 258 lealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesg 356
                  +a++y +  +d++++ lpr s++r+++E+  + ++i+nv+a+eg +r+er e  +kW++r+++a F+ + ++e+ + ++k++l +++  g+ +++e++
  MCI04965.1   2 RSAFNYLWIPYDTVDTFLPRGSKQRQWYEAD-ICWKIENVIAHEGVQRVERDEPIGKWEQRMRNANFQGIGFGEECVGEVKAMLDEHA-AGWGLKKEDE 98 
                 6799***************************.********************************************************.99******** PP

        GRAS 357 slvlgWkdrpLvsvSaW 373
                 ++vl+Wk++++v++SaW
  MCI04965.1  99 CIVLTWKGHNVVFASAW 115
                 ***************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 118 aa     Download sequence    
LRSAFNYLWI PYDTVDTFLP RGSKQRQWYE ADICWKIENV IAHEGVQRVE RDEPIGKWEQ  60
RMRNANFQGI GFGEECVGEV KAMLDEHAAG WGLKKEDECI VLTWKGHNVV FASAWLPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.11e-52GRAS family protein