PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI05545.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family GRAS
Protein Properties Length: 292aa    MW: 32552.9 Da    PI: 5.2865
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI05545.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS212.62.1e-65322913272
        GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
                 ++L++ Ae +++g+  +aq +Larl+++ sp g+p++R+ +y++eAL+  l++++++       ++ s+ + + ++ a+k fse+sP+l+f+++t+Nq 
  MCI05545.1  32 DQLYKTAELIEAGNPVQAQGILARLNHQLSPIGKPFERASFYVKEALQLMLHSNGNN------LNAFSPISFIFKIGAYKSFSEISPVLQFANFTCNQV 124
                 689**************************************************4444......4444445589************************** PP

        GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeL....r. 195
                 + ea+e+ +r+Hi+Dfdi+ G+QW +++q+L  R +g psl+iT+v+sp+s ++ el+ t+ +L+++A+ l++pfef++l ++ l++    ++    + 
  MCI05545.1 125 LIEALERFDRIHIVDFDIGFGVQWSSFMQELVLRGNGIPSLKITAVVSPSSCNEIELNFTQXNLSQYAKDLNMPFEFSILNMEFLNSP---SFpqpaHf 220
                 *******************************************************************************955544443...33222231 PP

        GRAS 196 vkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsle 272
                 ++++Ea+ Vn+ ++ +  +      +s  +  L++vk+l+Pkvvv  ++++d+ + ++ + +++ l++ys+l++sl+
  MCI05545.1 221 FDSNEAIGVNFPVSSFIGY------PSSFPLALHFVKQLRPKVVVTLDKNCDRLDVPLPTNVVHVLQCYSSLLESLD 291
                 555*********9766655......4445669*******************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
QSSVVPFTKQ QKVSSTIAGD DASNQLQQSI FDQLYKTAEL IEAGNPVQAQ GILARLNHQL  60
SPIGKPFERA SFYVKEALQL MLHSNGNNLN AFSPISFIFK IGAYKSFSEI SPVLQFANFT  120
CNQVLIEALE RFDRIHIVDF DIGFGVQWSS FMQELVLRGN GIPSLKITAV VSPSSCNEIE  180
LNFTQXNLSQ YAKDLNMPFE FSILNMEFLN SPSFPQPAHF FDSNEAIGVN FPVSSFIGYP  240
SSFPLALHFV KQLRPKVVVT LDKNCDRLDV PLPTNVVHVL QCYSSLLESL DA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-83GRAS family protein