PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI05925.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family GATA
Protein Properties Length: 211aa    MW: 23043.2 Da    PI: 10.933
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI05925.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA611.4e-19125159135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 Cs+Cg+tkTp+WR gp g ktLCnaCG++y++ +l
  MCI05925.1 125 CSHCGVTKTPQWRTGPLGAKTLCNACGVRYKSGRL 159
                 *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MPVVTLTTTE KNPKGVVVSE PKPKNEIPSP VFTTFKTPVQ TKARSKRTRT GVRVWPFGSN  60
TLTESSSSST TSSSTSSSPT SPLLIYTNLV PKXXXXXXXX XXXXXXXXXX XXXTVVVAPA  120
APRRCSHCGV TKTPQWRTGP LGAKTLCNAC GVRYKSGRLL PEYRPACSPT FSSELHSNHH  180
RKVLEMRRKK EVVGGVEIET GLSPSPVVPS F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G51080.13e-45GATA family protein