PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI06105.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family G2-like
Protein Properties Length: 282aa    MW: 31609.7 Da    PI: 7.4275
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI06105.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like95.54.1e-3089142155
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 +prl+Wtp+LH+rFv++v++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  MCI06105.1  89 RPRLVWTPQLHKRFVDVVAHL-GIKNAVPKTIMQLMNVEGLTRENVASHLQKYRL 142
                 59*******************.********************************8 PP
2Myb_DNA-binding48.61.8e-1591141148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+ WT+++++++vd+v+ lG +   +ktI++ m+ +g+t++++ s++qky+
       MCI06105.1  91 RLVWTPQLHKRFVDVVAHLGIKnaVPKTIMQLMNvEGLTRENVASHLQKYR 141
                      789*******************9***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
SAFSISPEPH RTLIDVNRAS RNTLSILRNS VGTNHNQNFS PEPEEEDEEI EDETDRDGSG  60
SDSRKXRKLD SVTEEADSAV RTTETTLKRP RLVWTPQLHK RFVDVVAHLG IKNAVPKTIM  120
QLMNVEGLTR ENVASHLQKY RLYLKRMQGL SNDAPSSSDH LFASTPVPQS LQLQQHESVS  180
ANNHSHSHSN GHGNGNNSHS HHSVTIPMPY PPPPTMMSMP PLLGMGHHHP HHHPHGHMGM  240
SLPPPSGSNS YRSHPFNMMH HRDWPPNPHS HHPHMSANDS NK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46640.23e-63G2-like family protein