PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI06543.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

G2-like

Protein Properties

Length: 142aa MW: 16363.7 Da PI: 7.3507

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI06543.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	64.1	2.6e-20	95	142	3	51
G2-like 3 rlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 +rWt++L e F+++v+qL G+ +AtPk+ilelm+v+gLt +v+SHLQ MCI06543.1 95 HIRWTEKLRELFINVVNQL-GPAEATPKRILELMNVPGLTKPQVASHLQ 142 78***************.9*************************9 PP
2	Myb_DNA-binding	36.4	1.2e-11	97	142	3	45
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwq 45 rWT+ + el++++v+qlG+ t+k+I + m+ g+t q+ s++q MCI06543.1 97 RWTEKLRELFINVVNQLGPAeaTPKRILELMNvPGLTKPQVASHLQ 142 8***************77**********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 142 aa Download sequence
MSDDESQSAT IKAFENGADE FWCKPLDENR IKYMWRLVQK KEIENKNKQE DDCVGEPSEV 60 RKVLKKMGRD NLENTTNGCV GEPSEVRKVL QTRTHIRWTE KLRELFINVV NQLGPAEATP 120 KRILELMNVP GLTKPQVASH LQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	1e-16	ARR-B family protein