PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI06684.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family GRAS
Protein Properties Length: 85aa    MW: 10104.5 Da    PI: 4.9277
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI06684.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS60.63.3e-19284271353
        GRAS 271 leaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrvee 353
                 l++ +pre+ er+ +E+e++g+e+ nv+aceg er+er et+++W+ r+ +aGF + ++++++++ a   ++  + + + ++e
  MCI06684.1   2 LDSIVPREDWERMLIEKEIFGKEALNVIACEGCERVERPETYRQWQVRILRAGFLQQTFGKNTVERAVEKVKSSYHKDFVIDE 84 
                 78889***************************************************************999999988899987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 85 aa     Download sequence    
MLDSIVPRED WERMLIEKEI FGKEALNVIA CEGCERVERP ETYRQWQVRI LRAGFLQQTF  60
GKNTVERAVE KVKSSYHKDF VIDED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.15e-34GRAS family protein