PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI06733.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family B3
Protein Properties Length: 112aa    MW: 12579.4 Da    PI: 11.4626
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI06733.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B363.63.1e-205703198
                .--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3 31 eesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                + +++l+ +d++g +W++k+i+r++++r++lt+GW+ Fv +++L +gD++vF   + +++el+v+v+r
  MCI06733.1  5 TPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFL--RGENGELRVGVRR 70
                445699***********************************************..449999*****98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 112 aa     Download sequence    
MSQPTPTQEL VAKDLHGYEW RFKHIFRGQP RRHLLTTGWS TFVTSKRLVA GDTFVFLRGE  60
NGELRVGVRR LARQSSSMSS SVISSQSMHL GVLATASHAV ASQTLFVVYY KP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46530.32e-57ARF family protein