PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI06809.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family MYB_related
Protein Properties Length: 151aa    MW: 17287.1 Da    PI: 11.0317
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI06809.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.27.6e-083321748
                     HHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 17 kqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     k +G++ W+ Ia+ +  gRt++ +k+r+ +++
       MCI06809.1  3 KVFGNR-WTEIAKVVS-GRTDNAVKNRFSTLR 32
                     679*99.*********.**********98875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    
AQKVFGNRWT EIAKVVSGRT DNAVKNRFST LRKKREXXXX XXKENIIPYI DSNSKRNISH  60
QGYNTNAMSE SAMPVKKMRR AHIPHGANKV NFGDRSHLRN AVSTNQQPRA PFAELDKKSN  120
CVKNLPDRHH VFNDEFNSSG TCLKWNLNLS L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02820.11e-31MYB family protein