PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI06870.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family SBP
Protein Properties Length: 113aa    MW: 13220.5 Da    PI: 5.6923
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI06870.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP80.13.3e-2562111150
                 --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEE CS
         SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfh 50 
                 +Cqve+C+adlseak+yhrrhkvCe h+kap+v ++g++qrfCqqCsrf 
  MCI06870.1  62 CCQVENCDADLSEAKQYHRRHKVCEYHAKAPAVHIAGMQQRFCQQCSRFD 111
                 6************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 113 aa     Download sequence    
METRRSEGKR SLRYKEEDEE EEEDDMDFEE EEDGRRKRVV TDLYSNKRGS NKAGGSSNIT  60
PCCQVENCDA DLSEAKQYHR RHKVCEYHAK APAVHIAGMQ QRFCQQCSRF DKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33810.13e-25SBP family protein