PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI06983.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family MYB_related
Protein Properties Length: 120aa    MW: 13643.1 Da    PI: 5.0065
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI06983.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.52e-10852345
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                     +WT+eE +l+ +a + + ++   +W+++a++++ g+t  ++   + 
       MCI06983.1  8 KWTPEENKLFENALAVHDKDtpdRWHRVAEMIP-GKTVGDVMKQYK 52
                     8********************************.***999988775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    
MEDNNTTKWT PEENKLFENA LAVHDKDTPD RWHRVAEMIP GKTVGDVMKQ YKELEDDVCN  60
IEAGLIPVPG YNTPTSPFTL DWVNSSGYDG FKGSGKRSPL ARATEHERKK GVPWTEEEHK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.17e-53MYB family protein