PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI07120.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family B3
Protein Properties Length: 231aa    MW: 25796.6 Da    PI: 9.606
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI07120.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B373.13.5e-23113214299
                 EEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
          B3   2 fkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                 fk+lt+sd+++ g +++p+ +a+++      + k++  ++l+++d +g++W++++iy++ ++r+++t+GW++Fv+ ++L +gD++vF   ++  ++ +v
  MCI07120.1 113 FKTLTRSDANNGGAFSVPRGCANKIfppldlKAKPAPFQELSFTDVHGEEWKFRHIYSGAPQRHLITSGWSKFVDKKKLVVGDSLVFL--KNPAGRIFV 209
                 69***************************9966777778*************************************************..779999*** PP

                 EEE-S CS
          B3  95 kvfrk 99 
                 +++rk
  MCI07120.1 210 GIRRK 214
                 **996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MALQQPSRVD PKLWQRCAGD SIKIPKLHSK VYYFPQGHLE HSNPSPSTQS LSLINGYRPF  60
IPCIISAIDL LADPHTDEVF AKLLLTPVAD GTIEPRDVPY EDQENNVEVV SSFKTLTRSD  120
ANNGGAFSVP RGCANKIFPP LDLKAKPAPF QELSFTDVHG EEWKFRHIYS GAPQRHLITS  180
GWSKFVDKKK LVVGDSLVFL KNPAGRIFVG IRRKFDASRS GKIREKAVME A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77850.12e-70ARF family protein