PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI07452.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family C2H2
Protein Properties Length: 147aa    MW: 16887.1 Da    PI: 9.1675
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI07452.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2163.3e-056890123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                + C +Cgk F  + + ++H +++
  MCI07452.1 68 FMCRKCGKAFAVRGDWRTHEKNC 90
                89*****************9987 PP
2zf-C2H210.70.001798113621
                 TTEEESSHHHHHHHHH CS
     zf-C2H2   6 CgksFsrksnLkrHir 21 
                 Cg  F++k +Lk Hir
  MCI07452.1  98 CGSDFKHKRSLKDHIR 113
                 ***************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    
MHMWGHGSQY RKGPESLRGT QPTGMLRLPC YCCSPGCRNN IDHPRAKPLK DFRTLQTHYK  60
RKHGIKPFMC RKCGKAFAVR GDWRTHEKNC GKLWYCLCGS DFKHKRSLKD HIRAFGSGHA  120
AYGINGFEEE DEPASEVEQD NDSTQTQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57670.11e-102C2H2 family protein