PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI07503.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

NF-YB

Protein Properties

Length: 168aa MW: 18325.3 Da PI: 6.9336

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI07503.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	186.1	2.5e-58	16	111	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 reqdrflPianvsrimkk+lPanakisk+aketvqecvsefisf+t+easdkcq+ekrktingddllwa++tlGfedyveplk+yl+kyre+egek MCI07503.1 16 REQDRFLPIANVSRIMKKALPANAKISKEAKETVQECVSEFISFITGEASDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKIYLSKYREMEGEK 111 89********************************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 168 aa Download sequence
MAESDNESGG GQTGCREQDR FLPIANVSRI MKKALPANAK ISKEAKETVQ ECVSEFISFI 60 TGEASDKCQK EKRKTINGDD LLWAMTTLGF EDYVEPLKIY LSKYREMEGE KSAMIGRSDH 120 RDHGNVGXGS GGVYNHGVGV SSSSMMMMMG HNMYGSGSGS PSFGRSTR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14540.1	2e-72	NF-YB family protein