PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI07554.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family B3
Protein Properties Length: 196aa    MW: 21568.8 Da    PI: 6.5152
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI07554.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3452e-142494697
                EEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
          B3 46 WevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97
                W+v l  + ++++ ++t+GW++Fvk++ Lke+D++vFk++g+s f   v +f
  MCI07554.1  2 WNVGL--TTRDDTLYFTNGWQQFVKDHSLKENDVLVFKYKGESHF--EVLIF 49
                9****..99999*****************************9999..66665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MWNVGLTTRD DTLYFTNGWQ QFVKDHSLKE NDVLVFKYKG ESHFEVLIFG GESLCEKAAS  60
YFVRKCGHAQ TEQGGSKAKD TNTATEEVIN TASNGGVECG SPVKFQRLNS IGTPLDVPFV  120
TTNETTFNTG VESASPEQFM ADAVTKTTPV VIPSQTTGKR TKKXXXXXXX XXXXXXXXXX  180
KAANSSERAL EKEHSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.13e-27B3 family protein