PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI07561.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family bHLH
Protein Properties Length: 168aa    MW: 18431.9 Da    PI: 9.9001
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI07561.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.41.1e-07130156430
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC CS
         HLH   4 ahnerErrRRdriNsafeeLrellPka 30 
                 +h+ +Er RR++iN ++  L+el+P +
  MCI07561.1 130 SHSLAERARREKINARMKLLQELVPGC 156
                 8************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
QVVELLHSPE ITGKPPKPYP LTCDTGNLTF PSNTTARFSV FAGENKNTAN VNSLLPEVKD  60
EVPETEGGGC VSDPTIENKK SKGAKRKERE KKVKVSSKKS KSIADENSGN GGDELPYVHV  120
RVRRGQATDS HSLAERARRE KINARMKLLQ ELVPGCNKVG PYSFLLRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57800.29e-31bHLH family protein