PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI07570.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family Trihelix
Protein Properties Length: 160aa    MW: 18687.3 Da    PI: 4.5469
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI07570.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix81.89.5e-263682187
    trihelix 21 lrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
                ++++  k+plWee+s+ m+  g++r++k+Ckekwen+nk++kk+ke++kkr +e+s+tcpyf+ql+a
  MCI07570.1  3 YQENGPKGPLWEEISSLMKNLGYNRNAKRCKEKWENINKYFKKVKESNKKR-PEDSKTCPYFHQLDA 68
                678889********************************************8.99***********85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    
MKYQENGPKG PLWEEISSLM KNLGYNRNAK RCKEKWENIN KYFKKVKESN KKRPEDSKTC  60
PYFHQLDALY REKNKGEGAA VARPEGTMMA PLMVQPEQQW PPQQPPXXXX XXXXXEDAEK  120
DRPHRDEEGF YDDDDGDDEE EEDEGSDNYE VVANKPPPPQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.18e-44Trihelix family protein