PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI07696.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family C3H
Protein Properties Length: 217aa    MW: 25864.1 Da    PI: 11.0047
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI07696.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH21.73.7e-074265226
                -S---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH  2 ktelCrffartGtCkyGdrCkFaHg 26
                +++ Cr + +  tC++G+ C+F+H 
  MCI07696.1 42 REATCRQYEE-NTCNRGGYCNFMHL 65
                6789**9999.*************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MSSCVPLSVG LQFFVKFEYQ LLAHLFAGRP IIVDFSPVTD FREATCRQYE ENTCNRGGYC  60
NFMHLKRISR ELRRQLFGKR HERHSRSRSR SPYRHRSYEE WSHRSRSSKY DDRDRDRDYH  120
XDSDSRRRRT SSPGRRRGRS PSRSRSPVGR RNRSPVRDGS EERRARIEQW NREREQKEPA  180
IKVNTEETNN GNNGGHSQNA STFHENQQQH QSAQEGY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1117129RDYHXDSDSRRRR