PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI07767.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

ARF

Protein Properties

Length: 227aa MW: 25506.5 Da PI: 9.374

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI07767.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	37.3	5e-12	1	41	57	99
TEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 57 gryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +r++lt+GW++Fv++++L +gD+vvF + +++el+v+++r+ MCI07767.1 1 RRHLLTTGWSSFVNQKKLVAGDSVVFL--RAENGELCVGIRRA 41 579**********************..449999****97 PP
2	Auxin_resp	91	2.1e-30	111	179	1	68
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsd 68 a++ a+++++FevvY+Prast+eF+vk+++v++a++++++ GmRfkm fetedss++++ +Gt+++v+ MCI07767.1 111 AVKLAANNQPFEVVYYPRASTPEFCVKASSVRAAMRIQWCSGMRFKMPFETEDSSRISWfMGTIASVQV 179 67899*************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 227 aa Download sequence
RRHLLTTGWS SFVNQKKLVA GDSVVFLRAE NGELCVGIRR AKKGIGSGFD GSSCGWTSGS 60 GSNNGNCXXX XXXXXXXXXX XXXXXXXXXX XXXDGNLSGR VRVRHEDVME AVKLAANNQP 120 FEVVYYPRAS TPEFCVKASS VRAAMRIQWC SGMRFKMPFE TEDSSRISWF MGTIASVQVX 180 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXALSIN DQFYGHL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	2e-55	ARF family protein