PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI08389.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

bHLH

Protein Properties

Length: 160aa MW: 17478.6 Da PI: 9.4948

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI08389.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13.5	0.00013	52	89	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLrel+P+ a K s + Le+ ++++ Lq MCI08389.1 52 RQLIQDRIKELRELVPNgA------KCSIDSLLERSIKHMLFLQ 89 67799************77......5555567777777777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 160 aa Download sequence
SSGICGVMSS KGVSSTCPSA CSEQLERSSE PSKNSKKRAR PGESCRPRPR DRQLIQDRIK 60 ELRELVPNGA KCSIDSLLER SIKHMLFLQG IAKHADKLTK XAXTKSKLHH METDILGSSS 120 SEQGSSWAVE VGGHLKVHSI LVENLSKNGQ MLVEVCLSMT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.2	1e-43	bHLH family protein